run_stacking: Run stacking algorithm

In merrillrudd/LIME: Length-based Integrated Mixed Effects (LIME) assessment method

Description

run_stacking runs stacking algorithm for length-based stock assessment methods given quadrature nodes

Usage

run_stacking(modpath, iter = NULL, lh, model, nodes, dim, input_data = NULL)

Arguments

modpath,	the directory to save results
iter,	the iteration for a simulation study, default=NULL for an assessment
lh,	the life history list output from LIME::create_lh_list
model,	"LIME" or "LBSPR"
nodes,	data frame of nodes mapped to life history parameters, number of rows = number of nodes, number of columns = life history parameter K, Loo, M, Lm
dim,	"1D" to label 1-d stacking, "2D" to label 2-d stacking
input_data,	default=NULL for simulation study, data list following rules by LIME for regular assessment

Value

List, a tagged list of potentially useful benchmarks

Author(s)

M.B. Rudd

merrillrudd/LIME documentation built on June 20, 2020, 2:58 p.m.