API for mervesa/HiCDCPlus
Hi-C Direct Caller Plus
| Global functions | |
|---|---|
| .GLM | Source code |
| .TopDom | Source code |
| .dispersionfunction | Source code |
| .download_juicer | Source code |
| .get_cache | Source code |
| .get_range | Source code |
| .glm_nb_trycatch | Source code |
| .hic2htcexp | Source code |
| .plotNormalizationFactors | Source code |
| .readDiffInputFiles | Source code |
| .remove_outliers | Source code |
| .strip_glm | Source code |
| .weighted_quantile | Source code |
| HTClist2gi_list | Man page Source code |
| HiCDCPlus | Man page Source code |
| HiCDCPlus_chr | Man page Source code |
| HiCDCPlus_parallel | Man page Source code |
| add_1D_features | Man page Source code |
| add_2D_features | Man page Source code |
| add_hic_counts | Man page Source code |
| add_hicpro_allvalidpairs_counts | Man page Source code |
| add_hicpro_matrix_counts | Man page Source code |
| construct_features | Man page Source code |
| construct_features_chr | Man page Source code |
| construct_features_parallel | Man page Source code |
| expand_1D_features | Man page Source code |
| extract_hic_eigenvectors | Man page Source code |
| generate_binned_gi_list | Man page Source code |
| generate_bintolen_gi_list | Man page Source code |
| generate_df_gi_list | Man page Source code |
| get_chr_sizes | Man page Source code |
| get_chrs | Man page Source code |
| get_enzyme_cutsites | Man page Source code |
| gi_list2HTClist | Man page Source code |
| gi_list_Dthreshold.detect | Man page Source code |
| gi_list_binsize_detect | Man page Source code |
| gi_list_read | Man page Source code |
| gi_list_topdom | Man page Source code |
| gi_list_validate | Man page Source code |
| gi_list_write | Man page Source code |
| hic2icenorm_gi_list | Man page Source code |
| hicdc2hic | Man page Source code |
| hicdcdiff | Man page Source code |
| straw | Man page Source code |
| straw_dump | Man page Source code |
