gi_list_validate: gi_list_validate
In mervesa/HiCDCPlus: Hi-C Direct Caller Plus
View source: R/gi_list_validate.R
gi_list_validate R Documentation
gi_list_validate
Description
This function validates a gi_list instance.
Usage
gi_list_validate(gi_list)
Arguments
gi_list
gi_list object to be verified. In order to pass without
errors, a gi_list object (1) has to be a list of
InteractionSet::GInteractions objects, (2) each list element has to be named
as chromosomes and only contain intra-chromosomal interaction information,
(3) mcols(.) for each list element should at least contain pairwise
genomic distances in a column named 'D'.
Value
invisible value if the gi_list instance is valid. Otherwise, an error
is raised.
Examples
gi_list<-generate_binned_gi_list(1e6,chrs='chr22')
gi_list_validate(gi_list)
mervesa/HiCDCPlus documentation built on June 8, 2022, 3:43 a.m.
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View source: R/gi_list_validate.R
| gi_list_validate | R Documentation |
gi_list_validate
Description
This function validates a gi_list instance.
Usage
gi_list_validate(gi_list)
Arguments
gi_list |
gi_list object to be verified. In order to pass without
errors, a gi_list object (1) has to be a list of
InteractionSet::GInteractions objects, (2) each list element has to be named
as chromosomes and only contain intra-chromosomal interaction information,
(3) |
Value
invisible value if the gi_list instance is valid. Otherwise, an error is raised.
Examples
gi_list<-generate_binned_gi_list(1e6,chrs='chr22') gi_list_validate(gi_list)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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