API for metaOmic/preproc
Preprocessing of Normalized Gene Expression Data

Global functions
Annotate Man page
Annotate,Study-method Man page
Annotate,matrix-method Man page
CheckAndInstall Source code
DTYPE.RNAseq.FPKM Man page
DTYPE.RNAseq.count Man page
DTYPE.all Man page
DTYPE.continuous Man page
DTYPE.discrete Man page
DTYPE.microarray Man page
Filter Man page Source code
Filter.Study Source code
Filter.list Source code
GetBiomaps Source code
ID.TYPE.EntrezID Man page
ID.TYPE.RefSeqID Man page
ID.TYPE.all Man page
ID.TYPE.geneSymbol Man page
ID.TYPE.probeID Man page
IMPUTE.method.all Man page
IMPUTE.method.knn Man page
IMPUTE.method.remove Man page
Impute Man page
Impute,Study-method Man page
Impute,matrix-method Man page
Merge Man page Source code
Merge.Study Source code
Merge.matrix Source code
NTYPE.all Man page
NTYPE.continuous Man page
NTYPE.discrete Man page
Naive Source code
PLATFORM.GenePLATFORM.Mouse.Genome.430.2.0 Man page
PLATFORM.HumanHT.12.V3.Bead.Array Man page
PLATFORM.HumanHT.12.V4.Bead.Array Man page
PLATFORM.HumanWG.6.V1.Bead.Array Man page
PLATFORM.HumanWG.6.V2.Bead.Array Man page
PLATFORM.HumanWG.V2.Bead.Array Man page
PLATFORM.MouseWG.6.v1.0.Bead.Array Man page
PLATFORM.MouseWG.6.v2.0.Bead.Array Man page
PLATFORM.Rat.v1.0.Bead.Array Man page
PLATFORM.all Man page
PLATFORM.hgu133a Man page
PLATFORM.hgu133b Man page
PLATFORM.hgu133plus2 Man page
PLATFORM.hgu95a Man page
PLATFORM.hgu95av2 Man page
PLATFORM.hgu95b Man page
PLATFORM.hgu95c Man page
PLATFORM.hgu95d Man page
PLATFORM.hgu95e Man page
PLATFORM.hgug4100a Man page
PLATFORM.hgug4101a Man page
PLATFORM.hgug4110b Man page
PLATFORM.hgug4111a Man page
PLATFORM.hgug4112a Man page
PLATFORM.mgu74a Man page
PLATFORM.mgu74av2 Man page
PLATFORM.mgu74b Man page
PLATFORM.mgu74bv2 Man page
PLATFORM.mgu74c Man page
PLATFORM.mgu74cv2 Man page
PLATFORM.mgug4104a Man page
PLATFORM.mgug4120a Man page
PLATFORM.mgug4121a Man page
PLATFORM.mgug4122a Man page
PLATFORM.moe430a Man page
PLATFORM.moe430b Man page
PLATFORM.rat2302 Man page
PLATFORM.rgu34a Man page
PLATFORM.rgu34b Man page
PLATFORM.rgu34c Man page
PLATFORM.rgug4105a Man page
PLATFORM.rgug4130a Man page
PLATFORM.rgug4131a Man page
PoolReplicate Man page
PoolReplicate,Study-method Man page
PoolReplicate,matrix-method Man page
REPLICATE.IQR Man page
REPLICATE.all Man page
REPLICATE.average Man page
REPLICATE.largest Man page
ReadClinical Man page Source code
ReadExpr Man page Source code
SPECIES.all Man page
SPECIES.entrez.all Man page
SPECIES.entrez.human Man page
SPECIES.entrez.mouse Man page
SPECIES.entrez.rat Man page
SPECIES.human Man page
SPECIES.mouse Man page
SPECIES.rat Man page
SPECIES.refseq.all Man page
SPECIES.refseq.human Man page
SPECIES.refseq.mouse Man page
SPECIES.refseq.rat Man page
STYPE.all Man page
STYPE.multiple Man page
STYPE.single Man page
Study-class Man page
TO.MATRIX.clinicals Man page
TO.MATRIX.datasets Man page
TransformDataNames Source code
datasets.eg Man page
is.continuous Man page Source code
is.discrete Man page Source code
meta Man page
meta,Study-method Man page
ntype Man page
ntype,Study-method Man page
ntype,character-method Man page
print.Study Man page Source code
setClinical Man page Source code
show,Study-method Man page
study.eg Man page
stype Man page
stype,Study-method Man page
stype,list-method Man page
to.matrix Man page Source code
validateStudy Source code
metaOmic/preproc documentation built on Oct. 14, 2017, 10:17 a.m.