Files in metaOmic/preproc
Preprocessing of Normalized Gene Expression Data

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/annotate.R R/filter.R R/impute.R R/merge.R R/pool.replicate.R R/preproc.option.R R/read.expr.R R/study.R README.md
data/datasets.eg.rda
data/preproc.option.R
data/study.eg.rda
man/Annotate-Study-method.Rd man/Annotate-matrix-method.Rd man/Annotate.Rd man/DTYPE.RNAseq.FPKM.Rd man/DTYPE.RNAseq.count.Rd man/DTYPE.all.Rd man/DTYPE.continuous.Rd man/DTYPE.discrete.Rd man/DTYPE.microarray.Rd man/Filter.Rd man/ID.TYPE.EntrezID.Rd man/ID.TYPE.RefSeqID.Rd man/ID.TYPE.all.Rd man/ID.TYPE.geneSymbol.Rd man/ID.TYPE.probeID.Rd man/IMPUTE.method.all.Rd man/IMPUTE.method.knn.Rd man/IMPUTE.method.remove.Rd man/Impute-Study-method.Rd man/Impute-matrix-method.Rd man/Impute.Rd man/Merge.Rd man/NTYPE.all.Rd man/NTYPE.continuous.Rd man/NTYPE.discrete.Rd man/PLATFORM.GenePLATFORM.Mouse.Genome.430.2.0.Rd man/PLATFORM.HumanHT.12.V3.Bead.Array.Rd man/PLATFORM.HumanHT.12.V4.Bead.Array.Rd man/PLATFORM.HumanWG.6.V1.Bead.Array.Rd man/PLATFORM.HumanWG.6.V2.Bead.Array.Rd man/PLATFORM.HumanWG.V2.Bead.Array.Rd man/PLATFORM.MouseWG.6.v1.0.Bead.Array.Rd man/PLATFORM.MouseWG.6.v2.0.Bead.Array.Rd man/PLATFORM.Rat.v1.0.Bead.Array.Rd man/PLATFORM.all.Rd man/PLATFORM.hgu133a.Rd man/PLATFORM.hgu133b.Rd man/PLATFORM.hgu133plus2.Rd man/PLATFORM.hgu95a.Rd man/PLATFORM.hgu95av2.Rd man/PLATFORM.hgu95b.Rd man/PLATFORM.hgu95c.Rd man/PLATFORM.hgu95d.Rd man/PLATFORM.hgu95e.Rd man/PLATFORM.hgug4100a.Rd man/PLATFORM.hgug4101a.Rd man/PLATFORM.hgug4110b.Rd man/PLATFORM.hgug4111a.Rd man/PLATFORM.hgug4112a.Rd man/PLATFORM.mgu74a.Rd man/PLATFORM.mgu74av2.Rd man/PLATFORM.mgu74b.Rd man/PLATFORM.mgu74bv2.Rd man/PLATFORM.mgu74c.Rd man/PLATFORM.mgu74cv2.Rd man/PLATFORM.mgug4104a.Rd man/PLATFORM.mgug4120a.Rd man/PLATFORM.mgug4121a.Rd man/PLATFORM.mgug4122a.Rd man/PLATFORM.moe430a.Rd man/PLATFORM.moe430b.Rd man/PLATFORM.rat2302.Rd man/PLATFORM.rgu34a.Rd man/PLATFORM.rgu34b.Rd man/PLATFORM.rgu34c.Rd man/PLATFORM.rgug4105a.Rd man/PLATFORM.rgug4130a.Rd man/PLATFORM.rgug4131a.Rd man/PoolReplicate-Study-method.Rd man/PoolReplicate-matrix-method.Rd man/PoolReplicate.Rd man/REPLICATE.IQR.Rd man/REPLICATE.all.Rd man/REPLICATE.average.Rd man/REPLICATE.largest.Rd man/ReadClinical.Rd man/ReadExpr.Rd man/SPECIES.all.Rd man/SPECIES.entrez.all.Rd man/SPECIES.entrez.human.Rd man/SPECIES.entrez.mouse.Rd man/SPECIES.entrez.rat.Rd man/SPECIES.human.Rd man/SPECIES.mouse.Rd man/SPECIES.rat.Rd man/SPECIES.refseq.all.Rd man/SPECIES.refseq.human.Rd man/SPECIES.refseq.mouse.Rd man/SPECIES.refseq.rat.Rd man/STYPE.all.Rd man/STYPE.multiple.Rd man/STYPE.single.Rd man/Study-class.Rd man/TO.MATRIX.clinicals.Rd man/TO.MATRIX.datasets.Rd man/datasets.eg.Rd man/is.continuous.Rd man/is.discrete.Rd man/meta-methods.Rd man/meta.Rd man/ntype-methods.Rd man/ntype.Rd man/print.Study.Rd man/setClinical.Rd man/show-Study-method.Rd man/study.eg.Rd man/stype-methods.Rd man/stype.Rd man/to.matrix.Rd tests/all.R tests/components/annotation.R tests/components/impute.R tests/components/merge.R tests/components/pool.replicate.R tests/components/read.expr.R tests/components/study.R tests/components/test_helper.R tests/data/data.R
tests/data/dataset.annotated.csv
tests/data/study.csv
tests/data/study.edata.csv
tests/data/study.pdata.csv
tests/data/study.pdata.missing.csv
metaOmic/preproc documentation built on Oct. 14, 2017, 10:17 a.m.