Files in metabolomicsworkbench/MetENP
Metabolite enrichment analysis and their associated enriched pathways
.DS_Store
DESCRIPTION
LICENSE
MetENP.Rproj
NAMESPACE
R/anova_ana.R
R/comp_linkedto_pathways.R
R/compoundinfo.R
R/convert_refmet.R
R/data.R
R/dotplot_met_class_path.R
R/enzyme_gene_info.R
R/getExtension.R
R/getmwstudies.R
R/map_keggid.R
R/mapspspath.R
R/met_pathways.R
R/metclassenrichment.R
R/metcountplot.R
R/partial_join.R
R/path_enrichmentscore.R
R/pathinfo.R
R/plot_heatmap.R
R/plot_met_enrichment.R
R/plot_pathway_networks.R
R/plot_volcano.R
R/react_substrate.R
R/rxninfo.R
R/separate_data.R
R/significant_met.R
R/significant_met_own.R
README.md
binder/Dockerfile
data/korg.RData
data/ls_path.RData
inst/extdata/example.txt
inst/extdata/human_cachexia.csv
man/anova_ana.Rd
man/comp_linkedto_pathways.Rd
man/compoundinfo.Rd
man/convert_refmet.Rd
man/dotplot_met_class_path.Rd
man/enzyme_gene_info.Rd
man/getmwstudies.Rd
man/ls_path.Rd
man/map_keggid.Rd
man/mapspspath.Rd
man/met_pathways.Rd
man/metclassenrichment.Rd
man/metcountplot.Rd
man/path_enrichmentscore.Rd
man/pathinfo.Rd
man/plot_heatmap.Rd
man/plot_met_enrichment.Rd
man/plot_pathway_networks.Rd
man/plot_volcano.Rd
man/react_substrate.Rd
man/rxninfo.Rd
man/separate_data.Rd
man/significant_met.Rd
man/significant_met_own.Rd
vignettes/CaseStudy1_ST000915.html
vignettes/CaseStudy1_ST000915_20240325.html
vignettes/MetENP_ST000084.ipynb
vignettes/MetENP_ST000897.ipynb
vignettes/MetENP_ST000915.ipynb
vignettes/MetENP_ST001256.ipynb
vignettes/MetENP_ST001742.ipynb
vignettes/MetENP_ST001951.ipynb
vignettes/MetENP_ST001985.ipynb
vignettes/MetENP_ST002085.ipynb
vignettes/MetENP_ST002098.ipynb
vignettes/MetENP_ST002104.ipynb
vignettes/MetENP_vignette.rmd
vignettes/MetENP_vignette_Jupyter_notebook.ipynb
vignettes/example.txt
vignettes/human_cachexia.csv
vignettes/tmp/test.txt
