compoundinfo: Counts total no of compound in a pathway that has been linked...
In metabolomicsworkbench/MetENP: Metabolite enrichment analysis and their associated enriched pathways
compoundinfo R Documentation
Counts total no of compound in a pathway that has been linked to significant metabolites
This will help in calculating HG score for metabolite enrichment
Description
Counts total no of compound in a pathway that has been linked to significant metabolites
This will help in calculating HG score for metabolite enrichment
Usage
compoundinfo(met_path, sps)
Arguments
met_path
dataframe of pathways mapped to significant metabolites as obtained from met_pathways
sps
species name
Examples
compound_count = compoundinfo(met_path, sps)
metabolomicsworkbench/MetENP documentation built on April 12, 2025, 7:55 p.m.
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| compoundinfo | R Documentation |
Counts total no of compound in a pathway that has been linked to significant metabolites This will help in calculating HG score for metabolite enrichment
Description
Counts total no of compound in a pathway that has been linked to significant metabolites This will help in calculating HG score for metabolite enrichment
Usage
compoundinfo(met_path, sps)
Arguments
met_path |
dataframe of pathways mapped to significant metabolites as obtained from met_pathways |
sps |
species name |
Examples
compound_count = compoundinfo(met_path, sps)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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