plot_volcano: Plots Volcano plot
In metabolomicsworkbench/MetENP: Metabolite enrichment analysis and their associated enriched pathways
plot_volcano R Documentation
Plots Volcano plot
Description
Plots Volcano plot
Usage
plot_volcano(
stats_metabolites,
thres_pval,
thres_log2foldchange,
text_nooverlap
)
Arguments
stats_metabolites
dataframe obtained by running sig_metabolites.R
thres_pval
p value threshold
thres_log2foldchange
log2fold change threshold
text_nooverlap
TRUE to avoid text overlap, else FALSE
Examples
plot_volcano(stats_metabolites, thres_pval= 0.05,thres_log2foldchange = 0.5, text_nooverlap = TRUE)
metabolomicsworkbench/MetENP documentation built on April 12, 2025, 7:55 p.m.
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| plot_volcano | R Documentation |
Plots Volcano plot
Description
Plots Volcano plot
Usage
plot_volcano(
stats_metabolites,
thres_pval,
thres_log2foldchange,
text_nooverlap
)
Arguments
stats_metabolites |
dataframe obtained by running sig_metabolites.R |
thres_pval |
p value threshold |
thres_log2foldchange |
log2fold change threshold |
text_nooverlap |
TRUE to avoid text overlap, else FALSE |
Examples
plot_volcano(stats_metabolites, thres_pval= 0.05,thres_log2foldchange = 0.5, text_nooverlap = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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