Man pages for mgildea87/CVRCFunc
Functions for CVRC bioinformatics
| BetterVlnPlot | Generate violin plots from a Seurat object and vector of... |
| ExportSeurath5ad | Export integrated seurat assay for RNA velocity, CellRank,... |
| ExportSeuratMeta | Export meta data files for RNA velocity, CellRank, Scanpy,... |
| FindClusterSweep | Run common single-cell RNA-seq clustering algorithms as... |
| FindMarkers | Differential expression testing between 2 specified groups of... |
| FindMarkersBulk | Find all markers via pseudobulking and DESeq2 |
| FindMarkersCondition | Differential expression testing between conditions via... |
| StackedVlnPlot | Generate a stacked violin plot from a Seurat object and... |
| UpdateAnno | Update cell annotations. |
