UpdateAnno: Update cell annotations.
In mgildea87/CVRCFunc: Functions for CVRC bioinformatics
UpdateAnno R Documentation
Update cell annotations.
Description
Update cell annotations.
Usage
UpdateAnno(seurat, old_anno_ident, new_anno_ident, convert_file)
Arguments
seurat
Seurat object
old_anno_ident
Identity of annotations to be changed
new_anno_ident
Identity for new annotations
convert_file
absolute path to .csv file containing 2 columns. 1st column should have the header identical to old_anno_ident and contain each annotation to update as a row. The 2nd column should have a header identical to new_anno_ident and contain the updated annotations matched to old_anno_ident
Value
Seurat object with updated cell annotations specified in convert_file
mgildea87/CVRCFunc documentation built on Nov. 9, 2024, 7:39 p.m.
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| UpdateAnno | R Documentation |
Update cell annotations.
Description
Update cell annotations.
Usage
UpdateAnno(seurat, old_anno_ident, new_anno_ident, convert_file)
Arguments
seurat |
Seurat object |
old_anno_ident |
Identity of annotations to be changed |
new_anno_ident |
Identity for new annotations |
convert_file |
absolute path to .csv file containing 2 columns. 1st column should have the header identical to |
Value
Seurat object with updated cell annotations specified in convert_file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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