ExportSeurath5ad: Export integrated seurat assay for RNA velocity, CellRank,...
In mgildea87/CVRCFunc: Functions for CVRC bioinformatics
View source: R/ExportSeurath5ad.R
ExportSeurath5ad R Documentation
Export integrated seurat assay for RNA velocity, CellRank, Scanpy, and other python based analysis
Description
Export integrated seurat assay for RNA velocity, CellRank, Scanpy, and other python based analysis
Usage
ExportSeurath5ad(seurat, sample_ident, dir = "", assay)
Arguments
seurat
Path to Seurat .rds file
sample_ident
Identity for samples. Genereally 'orig.ident'
dir
Directory to output h5ad file
assay
which assay to save
Value
h5ad file with integrated assay
mgildea87/CVRCFunc documentation built on Nov. 9, 2024, 7:39 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/ExportSeurath5ad.R
| ExportSeurath5ad | R Documentation |
Export integrated seurat assay for RNA velocity, CellRank, Scanpy, and other python based analysis
Description
Export integrated seurat assay for RNA velocity, CellRank, Scanpy, and other python based analysis
Usage
ExportSeurath5ad(seurat, sample_ident, dir = "", assay)
Arguments
seurat |
Path to Seurat .rds file |
sample_ident |
Identity for samples. Genereally 'orig.ident' |
dir |
Directory to output h5ad file |
assay |
which assay to save |
Value
h5ad file with integrated assay
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.