DESeqResults: DESeqResults object and constructor

In mikelove/DESeq2: Differential gene expression analysis based on the negative binomial distribution

DESeqResults object and constructor

Description

This constructor function would not typically be used by "end users". This simple class indirectly extends the DataFrame class defined in the S4Vectors package to allow other packages to write methods for results objects from the DESeq2 package. It is used by results to wrap up the results table.

Usage

DESeqResults(DataFrame, priorInfo = list())

Arguments

DataFrame	a DataFrame of results, standard column names are: baseMean, log2FoldChange, lfcSE, stat, pvalue, padj.
priorInfo	a list giving information on the log fold change prior

Value

a DESeqResults object

mikelove/DESeq2 documentation built on Nov. 18, 2024, 1:37 p.m.