summary: Summarize DESeq results

In mikelove/DESeq2: Differential gene expression analysis based on the negative binomial distribution

Summarize DESeq results

Description

Print a summary of the results from a DESeq analysis.

Usage

## S4 method for signature 'DESeqResults'
summary(object, alpha, ...)

Arguments

object	a DESeqResults object
alpha	the adjusted p-value cutoff. If not set, this defaults to the alpha argument which was used in results to set the target FDR for independent filtering, or if independent filtering was not performed, to 0.1.
...	additional arguments

Author(s)

Michael Love

Examples

dds <- makeExampleDESeqDataSet(m=4)
dds <- DESeq(dds)
res <- results(dds)
summary(res)

mikelove/DESeq2 documentation built on Nov. 18, 2024, 1:37 p.m.