mikelove/DESeq2: Differential gene expression analysis based on the negative binomial distribution

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution.

Getting started

Package details

AuthorMichael Love, Simon Anders, Wolfgang Huber
Bioconductor views Bayesian ChIPSeq Clustering DifferentialExpression GeneExpression Microbiome Normalization PrincipalComponent RNASeq Regression Sequencing Transcription
MaintainerMichael Love <[email protected]>
LicenseLGPL (>= 3)
Version1.23.1
URL https://github.com/mikelove/DESeq2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("mikelove/DESeq2")
mikelove/DESeq2 documentation built on Nov. 6, 2018, 5:56 a.m.