minzheguo/SLICE: Determining Cell Differentiation and Lineage based on Single Cell Entropy

This is the R package of the SLICE algorithm, which utilizes single-cell RNA-seq (scRNA-seq) data to quantitatively measure cellular differentiation states based on single cell entropy and predict cell differentiation lineages via the construction of entropy directed cell trajectories.

Getting started

Package details

MaintainerMinzhe Guo <[email protected]>
LicenseGPL-3
Version0.99.0
URL https://github.com/minzheguo/SLICE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("minzheguo/SLICE")
minzheguo/SLICE documentation built on June 6, 2017, 1:17 a.m.