construct | construct a slice object from an expression matrix |
construct_from_seurat | construct a slice object from a Seurat object |
getDiffGenes | Detecting lineage dependent differentially expressed genes |
getEntropy | calculate scEntropies of individual cells |
getLineageModel | Infer entropy-directed cell lineage model |
getPatterns | Discover lineage dependent temporal patterns |
getProfiles | Exract lineage dependent gene expression profiles |
getRDS | reduce expression space |
getTrajectories | Reconstructing cell trajectories following a specific lineage... |
plotEntropies | Visualize and compare entropies |
slice | The slice Class |
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