Man pages for minzheguo/SLICE
Determining Cell Differentiation and Lineage based on Single Cell Entropy

constructconstruct a slice object from an expression matrix
getDiffGenesDetecting lineage dependent differentially expressed genes
getEntropycalculate scEntropies of individual cells
getLineageModelInfer entropy-directed cell lineage model
getPatternsDiscover lineage dependent temporal patterns
getProfilesExract lineage dependent gene expression profiles
getRDSreduce expression space
getTrajectoriesReconstructing cell trajectories following a specific lineage...
plotEntropiesVisualize and compare entropies
sliceThe slice Class
minzheguo/SLICE documentation built on June 6, 2017, 1:17 a.m.