API for minzheguo/SLICE
Determining Cell Differentiation and Lineage based on Single Cell Entropy
| Global functions | |
|---|---|
| SLICE_theme_opts | Source code |
| circleFun | Source code |
| concate.trajectories | Source code |
| construct | Man page Source code |
| construct_from_seurat | Man page Source code |
| ed | Source code |
| expressed.all | Source code |
| expressed.random | Source code |
| expressed.top | Source code |
| fitSmoothModel | Source code |
| fit_helper | Source code |
| get.PC.Transitions | Source code |
| get.PC.Transitions.stepwise | Source code |
| get.PCT.Profiles | Source code |
| get.SP.Transitions | Source code |
| get.SPT.Profiles | Source code |
| getCellCommunities | Source code |
| getCellSimilarityNetwork | Source code |
| getDiffGenes | Man page Source code |
| getEntropy | Man page |
| getLM.clustering | Source code |
| getLM.graph | Source code |
| getLineageModel | Man page |
| getPatterns | Man page Source code |
| getProfiles | Man page |
| getRDS | Man page |
| getStateGraph | Source code |
| getTrajectories | Man page |
| plotEntropies | Man page |
| plotViolin | Source code |
| reduceExpressionSpace | Source code |
| scEntropy | Source code |
| slice | Man page |
| slice-class | Man page |
