R/document_dataset.R

In mirjamlaager/mrsamcmc: An Implementation of Data Augmented MCMC for Inference on MRSA Transmission

#' Simulated patient data.
#'
#' A dataset containing admission and discharge dates, test
#' results and antibiotic use of 270 patients over 90 days.
#'
#'
#' @format a list containing 4 elements:
#' \describe{
#'   \item{patients}{a dataframe with four columns and 270 rows. Each row
#'   corresponds to a patient, the columns are admission, type,
#'   first_positive_test and discharge in days. If there is no type for a patient,
#'   type equals -1. If there is no positive test for a patient, first_positive_test
#'   equals 20000.}
#'   \item{test_results_positive}{a matrix with 270 rows and 30 columns. Each
#'   row corresponds to a patient. Entries correspond to the day of a positive
#'   test.}
#'    \item{test_results_negative}{a matrix with 270 rows and 30 columns. Each
#'   row corresponds to a patient. Entries correspond to the day of a negative
#'   test.}
#'    \item{antibiotics}{a matrix with 270 rows and 100 columns. Each
#'   row corresponds to a patient. Entries correspond to the day when an
#'   antibiotic was administered.}
#' }

"patient_data_simulated"