fitmod: Fit Bayesian Dose Response Model Using rJAGS

Description Usage Arguments Value Examples

View source: R/models.R

Description

Fit Bayesian Dose Response Model Using rJAGS

Usage

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fitmod(dat, modtext, modvars = c("prob"), burn, mcmcSamps = 1000,
  chains = 1, type = "bin", trace_plots = FALSE)

Arguments

dat

trial data_frame

modtext

BUGS formatted text of model compatibale with analysis data

modvars

vector of model variables to sample from model

burn

number of burn in samples

mcmcSamps

number of MCMC samples for inference

chains

number of sample chains

type

response data type c("bin","cont")

trace_plots

indicator if traceplots should be output

Value

MCMC samples (as MCMC list) from modtext on modvars

Examples

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Fit bayesian sigmoid EMAX model:

fitmod(sample_data,modtext="sigEmax",modvars="dr_prob",burn=10000,mcmcSamps=10000,chains=3)

mitchell-thomann/doseCombR documentation built on May 24, 2019, 9:54 a.m.