mkeays/ExpressionAtlas: Download datasets from EMBL-EBI Expression Atlas
This package is for searching for datasets in EMBL-EBI Expression Atlas, and downloading them into R for further analysis. Each Expression Atlas dataset is represented as a SimpleList object with one element per platform. Sequencing data is contained in a SummarizedExperiment object, while microarray data is contained in an ExpressionSet or MAList object.
Getting started
Browse package contents
Package details |
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|---|---|
| Author | Maria Keays |
| Bioconductor views | ArrayExpress ExperimentData ExpressionData MicroarrayData SequencingData |
| Maintainer | Suhaib Mohammed <suhaib@ebi.ac.uk> |
| License | GPL (>= 3) |
| Version | 1.9.1 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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