findCutoffsRun: Finding cutoffs
In mknoll/cnAnalysis450k: Copy Number Analysis for 450k Illumina Methylation Arrays
Description
Usage
Arguments
Value
Description
Analyzes row-wise histograms by selecting the global maximum (0),
as well as one further local maximum right (+) and left (-)
Usage
1
findCutoffsRun(data, zeichne, ignoreNAs, eps, proximity)
Arguments
data
Inputdata
zeichne
Debugging
ignoreNAs
F / T: if NAs occure, proceed, otherwise fail
eps
difference between x points (internal calculation)
proximity
how many previous / following rows should be
considered for cutoff determination? c(prev, folw)
Value
identified cutoffs
mknoll/cnAnalysis450k documentation built on May 23, 2019, 2:01 a.m.
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Description Usage Arguments Value
Description
Analyzes row-wise histograms by selecting the global maximum (0), as well as one further local maximum right (+) and left (-)
Usage
1 | findCutoffsRun(data, zeichne, ignoreNAs, eps, proximity)
|
Arguments
data |
Inputdata |
zeichne |
Debugging |
ignoreNAs |
F / T: if NAs occure, proceed, otherwise fail |
eps |
difference between x points (internal calculation) |
proximity |
how many previous / following rows should be considered for cutoff determination? c(prev, folw) |
Value
identified cutoffs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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