getThresholds: Get tissue class thresholds

In mknoll/imageanalysisBrain: Analysis of Brain Imaging Data

Description

Returns cutoffs for different tissue classes, identified with identifyMinima(getMeasurements(brainImage), iterat=10000) and set with setThresholds().

Usage

getThresholds(img)

Arguments

img	brainImage instance

Value

adjusted imageBrain object

Examples

options("BITSIZE"=10)
data <- data.frame(x=1:15, y=1:15, 
z=c(rep(2,15), rep(3,15)), val=rnorm(6750))
img <- new("brainImage", data, "test", 10)
img <- setThresholds(img,
imageanalysisBrain::identifyMinima(getMeasurements(img), iterat=1000))
getThresholds(img)

mknoll/imageanalysisBrain documentation built on May 23, 2019, 2:01 a.m.