cran-comments.md

In mmollina/MAPPoly: Genetic Linkage Maps in Autopolyploids

Re-submission of MAPpoly package

This is a re-submission of the MAPpoly package. This version includes changes to address the issues that led to its archival on CRAN, specifically the failure in installing the package using --use-LTO. We have made corrections to ensure compatibility and successful installation with --use-LTO.

Changes in this submission include:

• Addressed the --use-LTO installation failure issue

Thank you for reviewing our re-submission!

Test environments

• local R installation (macOS Sonoma 14.3.1), R 4.3.3
• Apple clang version 14.0.0 (clang-1400.0.29.202)
• GNU Fortran (GCC) 12.2.0
• local R installation (Ubuntu 22.04), R 4.3.3
• gcc (Ubuntu 9.4.0-1ubuntu1~20.04.2) 9.4.0
• GNU Fortran (Ubuntu 9.4.0-1ubuntu1~20.04.2) 9.4.0

• Compiled using the following configuration:

  ./configure \ --prefix=/opt/R/${R_VERSION} \ --enable-R-shlib \ --enable-memory-profiling \ --with-blas \ --with-lapack\ --enable-lto=R

  And installed using R CMD INSTALL --use-LTO mappoly_0.4.1.tar.gz * local R installation (Ubuntu 22.04), R devel - Intel(R) oneAPI DPC++/C++ Compiler 2024.0.2 (2024.0.2.20231213) - ifx (IFX) 2024.0.2 20231213

• Win-builder (release and devel)

R CMD check results

0 errors | 0 warnings | 2 notes

• on local macOS: R 4.3.3
• installed size is 8.2Mb sub-directories of 1Mb or more:
  • R: 2.8Mb
  • data: 3.0Mb

• GNU make is a SystemRequirements.

• Checked with --use-LTO flag: Installation successful without any errors or warnings.

Downstream dependencies

We checked 3 reverse dependencies (3 from CRAN + 0 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package.

• We saw 0 new problems
• We failed to check 0 packages

mmollina/MAPPoly documentation built on March 8, 2024, 2:04 a.m.