get_counts_all_phases: Counts for recombinant classes

View source: R/get_counts.R

get_counts_all_phasesR Documentation

Counts for recombinant classes

Description

return the counts of each recombinant class (for two loci) in polyploid cross. The results of this function contains several matrices each one corresponding to one possible linkage phase. The associated names in the matrices indicates the number of shared homologous chromosomes. The row names indicates the dosage in loci k and k+1 respectively

Usage

get_counts_all_phases(
  x,
  ploidy,
  verbose = FALSE,
  make.names = FALSE,
  joint.prob = FALSE
)

mmollina/MAPPoly documentation built on March 8, 2024, 2:04 a.m.