plot.mappoly.prefpair.profiles: Plots mappoly.prefpair.profiles

In mmollina/MAPPoly: Genetic Linkage Maps in Autopolyploids

Plots mappoly.prefpair.profiles

Description

Plots mappoly.prefpair.profiles

Usage

## S3 method for class 'mappoly.prefpair.profiles'
plot(
  x,
  type = c("pair.configs", "hom.pairs"),
  min.y.prof = 0,
  max.y.prof = 1,
  thresh = 0.01,
  P1 = "P1",
  P2 = "P2",
  ...
)

Arguments

x	an object of class mappoly.prefpair.profiles
type	a character string indicating which type of graphic is plotted: "pair.configs" (default) plots the preferential pairing profile for the pairing configurations or "hom.pairs" plots the preferential pairing profile for the homolog pairs
min.y.prof	lower bound for y axis on the probability profile graphic (default = 0)
max.y.prof	upper bound for y axis on the probability profile graphic (default = 1)
thresh	threshold for chi-square test (default = 0.01)
P1	a string containing the name of parent P1
P2	a string containing the name of parent P2
...	unused arguments

mmollina/MAPPoly documentation built on March 8, 2024, 2:04 a.m.