screeplot: Scree plot of the 450k control probe intensities
In molepi/DNAmArray: Streamlined workflow for the quality control, normalization and bias-free analysis of Illumina methylation array data - The Leiden approach
View source: R/normalization.R
screeplot R Documentation
Scree plot of the 450k control probe intensities
Description
Scree plot of the 450k control probe intensities
Usage
screeplot(RGset, nmax = 10)
Arguments
RGset
object of class 'RGChannelSet'
nmax
maximal number of PC's to show
Details
Scree-plot to detect the optimal number of PC to use in Functional Normalization
Value
outut of prcomp using the control probe matrix
Author(s)
mvaniterson
molepi/DNAmArray documentation built on Aug. 24, 2022, 1:42 p.m.
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View source: R/normalization.R
| screeplot | R Documentation |
Scree plot of the 450k control probe intensities
Description
Scree plot of the 450k control probe intensities
Usage
screeplot(RGset, nmax = 10)
Arguments
RGset |
object of class 'RGChannelSet' |
nmax |
maximal number of PC's to show |
Details
Scree-plot to detect the optimal number of PC to use in Functional Normalization
Value
outut of prcomp using the control probe matrix
Author(s)
mvaniterson
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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