Man pages for monahton/GencodeInterrogator
Data Extraction and Manipulation from the GENCODE Database
| classify_exons | Classify exons as single, first, inner or last exons. |
| extract_introns | Extract introns coordinates from GENCODE gtf file as a... |
| extract_minus | Extract elements on the minus strand from a gtf file. |
| extract_pc | Extract protein-coding genes from basic annotation file |
| extract_plus | Extract elements on the plus strand from a gtf file. |
| gencode_compare | Compare Annotated Numbers between 2 Different Releases from... |
| genes_freq | Extract numbers of genes containing single or multiple... |
| load_gtf | Load a gtf file from GENCODE as a dataframe. |
| spliced_trans_length | Calculate the length of splices transcripts |
| trans_freq | Extract numbers of transcripts containing single or multiple... |
