gencode_compare: Compare Annotated Numbers between 2 Different Releases from...
In monahton/GencodeInterrogator: Data Extraction and Manipulation from the GENCODE Database
View source: R/gencode_compare.R
Description
This function compares the number of annotated genes, transcripts, exons or introns from 2 dataframes. It is used to comapre the different annotations between different releases from GENCODE
Usage
1
gencode_compare(data1, data2, type)
Arguments
data1
The name of the downloaded gtf file from GENCODE website of a particular release
data2
The name of the downloaded gtf file from GENCODE website of another release
type
A string specifying the genetic element to be compared
monahton/GencodeInterrogator documentation built on Dec. 24, 2019, 1:31 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/gencode_compare.R
Description
This function compares the number of annotated genes, transcripts, exons or introns from 2 dataframes. It is used to comapre the different annotations between different releases from GENCODE
Usage
1 | gencode_compare(data1, data2, type)
|
Arguments
data1 |
The name of the downloaded gtf file from GENCODE website of a particular release |
data2 |
The name of the downloaded gtf file from GENCODE website of another release |
type |
A string specifying the genetic element to be compared |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.