trans_freq: Extract numbers of transcripts containing single or multiple...
In monahton/GencodeInterrogator: Data Extraction and Manipulation from the GENCODE Database
Description
This function takes a dataframe of annotations provided by Gencode as input. It calculates the number of different exons of a transcript. The output is a dataframe containing the number of transcripts having 1,2,3... or several exons and their percentage.
Usage
1
trans_freq(x)
Arguments
x
The name of the downloaded gtf file from GENCODE website
monahton/GencodeInterrogator documentation built on Dec. 24, 2019, 1:31 p.m.
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Description
This function takes a dataframe of annotations provided by Gencode as input. It calculates the number of different exons of a transcript. The output is a dataframe containing the number of transcripts having 1,2,3... or several exons and their percentage.
Usage
1 | trans_freq(x)
|
Arguments
x |
The name of the downloaded gtf file from GENCODE website |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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