mqzhanglab/BSDE: Barycenter Single-Cell Differential Expression for Case-Control Studies
Single-cell RNAseq differential expression analysis for case-control studies using optimal transport. This is a nonparametric method for finding differentially expressed genes for case-control studies. Through the use of optimal transportation for aggregating distributions and computing their distances, our method overcomes the restrictive parametric assumptions imposed by standard mixed-effect-modeling approaches.
Getting started
Browse package contents
Package details |
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| Bioconductor views | DifferentialExpression Genetics RNASeq SingleCell |
| Maintainer | |
| License | MIT + file LICENSE |
| Version | 0.10.0 |
| URL | https://github.com/mqzhanglab/BSDE |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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