Given a completed PlasmoMAPI analysis, return a list of which hexes are significant outliers.
1 2 3 4 5 6 | get_significant_hexes(
proj,
empirical_tail = "both",
FDR = 0.05,
min_hex_coverage = 10
)
|
proj |
object of class |
empirical_tail |
whether to calculate empirical p-values using a
one-sided test ( |
FDR |
the false discovery rate, i.e. the probability that a hex identified as significant is actually a false positive. |
min_hex_coverage |
minimum coverage (number of edges assigned to a hex) for it to be included in the final result. |
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