plot_daily_states: Plot daily counts of each host state from simulation

In mrc-ide/PlasmoMAPI: Mapping Plasmodium Spatial Connectivity from Genetic Data

Description

For a set of simulation output produced by the function sim_falciparum(), plots daily simulated values in a given deme.

Usage

plot_daily_states(x, deme = 1, states = c("S", "E", "I"))

Arguments

x	object of class pm_sim.
deme	which deme to plot.
states	which states to plot. Can be any subset of c("S", "E", "I", "Sv", "Ev", "Iv").

mrc-ide/PlasmoMAPI documentation built on Oct. 1, 2020, 9:41 a.m.