fast_probability_basic: Probability of serial interval as a convolution of...
In mrc-ide/hermione: Robust estimation of COVID-19 Serial Interval

Description Usage Arguments Value Author(s)

Probability of serial interval as a convolution of infectiousness distribution of primary case and incubation period of secondary case

1	fast_probability_basic(t, tmax, inf_params, ip_params)

`t`	observed serial interval
`tmax`	the maximum time (from the onset of symptoms in the primary case) at which secondary case could have been infected
`inf_params`	list with components rate and shape for infectious period distribution
`ip_params`	list with components rate and shape for incubation period distribution

numeric. Probability of observing the given serial interval given the parameters of infectious period distributions and incubation period distributions

Sangeeta Bhatia

mrc-ide/hermione documentation built on Aug. 15, 2020, 9:16 a.m.