Man pages for mrc-ide/siR
Individual-based SIR models in R and Rcpp
| age_of_death | Probability death with be at a given age. |
| conditional_lifespan | Draw conditional lifespan |
| current_age | Draw current age |
| days_to_steps | Convert days to steps |
| demog_test | Test demography |
| draw_equilibrium_age | Draw an age (in days) from the equilibrium age distribution |
| draw_equilibrium_death_age | Draw a death age conditional on an age from the equilibrium... |
| draw_sample | Sample events for a group of individuals from binomial |
| equilibrium_age | Equilibrium age distribution. |
| equilibrium_age_death | Equilibrium age of death |
| equilibrium_age_distribution | Equilibrium age distribution |
| format_cpp | Format c++ |
| get_time | Model times |
| ibm_closed_SIR | Closed SIR (IBM) |
| infection_probability | Calculate the current probability of infection |
| lifetable_to_transtion_matrix | Lifetable to transition matrix |
| odin_closed_sir | Closed SIR (ODIN) |
| open_sir | Open sIR |
| open_sir_rcpp | Test demography |
| pipe | Pipe graphics |
| post | Post processing wrapper for c++ output |
| prob_death_who_to_annual | Smooth WHO life table death probabilites |
| rate_to_prob | Convert a rate to a probability |
| sample_double | Sample single double from range. |
| sample_int | Sample single integer from range. |
| set_time | Set time |
| weighted_sample_double | Sample single double from vector with probability weights. |
| weighted_sample_int | Sample single integer from vector with probability weights. |
| weighted_sample_min_double | Sample single double from vector with probability weights... |
| weighted_sample_min_int | Sample single integer from vector with probability weights... |
| years_to_steps | Convert years to steps |
