spim_combined_load: Load combined fits
In mrc-ide/spimalot: Support for 'sircovid'

spim_combined_load

R Documentation

Load combined fits

Load combined fits from a directory of regional fits

spim_combined_load(
  path,
  regions = "all",
  get_severity = FALSE,
  get_onward = TRUE
)

`path`	Directory name. Within here we expect to see `⁠<region>/fits.rds⁠` for each region in `sircovid::regions("all")`
`regions`	Region type passed to sircovid::regions (default is `all`, otherwise try `england`)
`get_severity`	Logical, indicating whether to extract severity (e.g. IFR, IHR, HFR, etc.) trajectories. Must default to `FALSE`, as these are routine (e.g. MTPs) `sircovid` outputs.
`get_onward`	Logical, indicating whether to extract projection trajectories for downstream (e.g. simulations) use. Default is `TRUE`, as these are routinely outputted in the RTM pipeline.