spim_multivariant_rt_plot: Create multivariant Rt plot

In mrc-ide/spimalot: Support for 'sircovid'

Create multivariant Rt plot

Description

Create multivariant Rt plot

Usage

spim_multivariant_rt_plot(
  dat,
  date,
  last_beta_days_ago = 21,
  region = "england",
  rt_type = "eff_Rt_general",
  manuscript = FALSE
)

Arguments

dat	Main fitting outputs object
date	Date of the analysis
last_beta_days_ago	Integer for setting last beta changepoint in relation to date of analysis
region	A string for the name of the region to plot
rt_type	A string, must be one of eff_Rt_general or Rt_general
manuscript	Logical indicating whether plots are for manuscript

Value

A ggplot2 object for multivariant Rt

mrc-ide/spimalot documentation built on Oct. 15, 2024, 12:15 p.m.