inst/doc/endotherm-model-equations.R

In mrke/NicheMapR: R implementation of Niche Mapper software for biophysical modelling

## ---- echo = FALSE, warning=FALSE---------------------------------------------
knitr::opts_chunk$set(
 eval = TRUE, tidy.opts=list(width.cutoff=60), tidy=TRUE  
)
library(knitr)

## ---- echo=FALSE, out.width = "100%", fig.align="center", fig.cap = "A cross section system diagram for heat flow in an animal", fig.pos='!h'----
include_graphics("Endo_System_Diagram.jpg")

## ---- echo=FALSE, out.width = "100%", fig.align="center", fig.cap = "The relationship between subroutines of the endoR program in NicheMapR.", fig.pos='!h'----
include_graphics("EndoR_scheme.jpg")

## ---- echo=FALSE, out.width = "100%", fig.align="center", fig.cap = "The exchange of respiratory gases entering the respiratory tract at imagainary surface 1, with carbon dioxide and water vapour added from the body and oxygen consumed according to the metabolic rate and the remainder exiting the body at imaginary surface 2. Figure modified from Porter et al. (2000)", fig.pos='!h'----
include_graphics("Gas_System_Diagram.jpg")