Files in ms609/ProfileParsimony
Phylogenetic Inference by Profile Parsimony
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md
R/ProfileScore.R
R/data.R
R/data_manipulation.R
R/info_extra_step.r
README.md
data/congreveLamsdellMatrices.RData
data/referenceTree.RData
inst/tests/test_file.R
man-roxygen/datasetParam.R
man-roxygen/splitsParam.R
man-roxygen/treeParam.r
man-roxygen/warnParam.R
man/DFact.Rd
man/Evaluate.Rd
man/ICPerStep.Rd
man/ICSteps.Rd
man/InfoAmounts.Rd
man/LDFact.Rd
man/LDFactorial.Rd
man/LogisticPoints.Rd
man/N1Spr.Rd
man/NRooted.Rd
man/NamedConstant.Rd
man/PhyDat.Rd
man/PrepareDataProfile.Rd
man/ProfileParsimony-package.Rd
man/ProfileScore.Rd
man/WithOneExtraStep.Rd
man/congreveLamsdellMatrices.Rd
man/referenceTree.Rd
tests/testthat.R
tests/testthat/test-ICS.R
tests/testthat/test-fitch.R
