map_pathway: Gets pathway maps and paints colors based on expression level...

Description Usage Arguments Value

Description

Gets pathway maps and paints colors based on expression level of genes

Usage

1
map_pathway(sig_table, type, org_code, out)

Arguments

sig_table

A table file from DESeq2 or edgeR

type

Is it DESeq2 or edgeR?

out

output folder

org

KEGG organism code

Value

A folder containing pathway with fold change value mapped


mshakya/RPiReT documentation built on May 26, 2019, 9:36 a.m.