API for mskilab/JaBbA
Infer cancer graph genomes from read depth and junctions

Global functions
.correct.slack Man page
.plot_ppfit Man page
.ramip_stub Man page
JaBbA Man page Source code
JaBbA.digest Source code
Rcplex2 Man page Source code
all.paths Source code
alpha Source code
check.Rcplex.control Source code
chr2num Source code
chromoplexy Source code
collapse.paths Source code
convex.basis Source code
cplex_customparams Source code
gr.tile.map Source code
jabba.alleles Source code
jabba2vcf Source code
jabba_stub Man page Source code
jbaMIP Source code
jmessage Man page Source code
karyograph Man page Source code
karyograph_stub Man page Source code
levapply Man page Source code
munlist Source code
plot_ppfit Source code
pp.nll Source code
ramip_stub Man page Source code
read.junctions Man page Source code
read_vcf Man page Source code
rel2abs Source code
segstats Source code
sparse_subset Source code
split.control.list Source code
sv.size Man page Source code
toCPXMatrix Source code
vaggregate Man page Source code
which.indel Man page Source code
write.tab Man page Source code
mskilab/JaBbA documentation built on May 12, 2018, 6:58 a.m.