Files in mskilab/JaBbA
Infer cancer graph genomes from read depth and junctions

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
JaBbA.pdf
NAMESPACE
R/CPX_matrix.R R/JaBbA.R R/Rcplex.R R/control.R README.md
configure
configure.ac
inst/extdata/coverage.txt
inst/extdata/hets.txt
inst/extdata/human_g1k_v37.chrom.sizes
inst/extdata/jab.cn.gs.2.rds
inst/extdata/jab.cn.gs.rds
inst/extdata/jab.reiterate.cn.gs.2.rds
inst/extdata/jab.reiterate.cn.gs.rds
inst/extdata/jabba.simple.rds
inst/extdata/junctions.bedpe
inst/extdata/junctions.vcf
inst/extdata/segs.rds
jba
rtdocs/vignetteGeneral/vignetteGeneral.Rrst
rtdocs/vignetteGeneral/vignetteGeneral.rst
srcs/src.blank/Makevars
srcs/src.blank/Makevars.in
srcs/src.blank/Makevars.win
srcs/src.blank/Rcplex2.c
srcs/src.blank/Rcplex2.h
srcs/src.rcplex/Makevars
srcs/src.rcplex/Makevars.win
srcs/src.rcplex/Rcplex2.c
srcs/src.rcplex/Rcplex2.h
srcs/src.rcplex/Rcplex_params.c
srcs/src.rcplex/Rcplex_utils.c
tests/testthat.R tests/testthat/test_JaBbA.R
mskilab/JaBbA documentation built on Dec. 1, 2018, 4:04 p.m.