README.md

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bamUtils

Set of utility functions to access reads, compute coverage, and extract variant sites from BAM files, based on Rsamtools, GenomicRanges and data.table

Installation

devtools::install_github("mskilab/bamUtils")

Users must install samtools to be executable via the command line



mskilab/bamUtils documentation built on Sept. 28, 2022, 3:45 p.m.