gGnome-package: gGnome: An R API to manipulate genome graphs
In mskilab/gGnome: gGnome: reference based assembly graph for analyzing rearranged genomes
gGnome-package R Documentation
gGnome: An R API to manipulate genome graphs
Description
The gGnome package provides a flexible, queriable R interface to graphs and walks of reference genomic intervals. gGnome is written in the R6 object oriented standard and built around a powerful GenomicRanges, data.table, and igraph backend, and thus supports agile interaction with graphs consisting of hundreds of thousands of nodes and edges.
Author(s)
Maintainer: Xiaotong Yao xiaotong.yao23@gmail.com
Authors:
Marcin Imielinski mai9037@med.cornell.edu [contributor]
mskilab/gGnome documentation built on June 10, 2025, 11:29 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| gGnome-package | R Documentation |
gGnome: An R API to manipulate genome graphs
Description
The gGnome package provides a flexible, queriable R interface to graphs and walks of reference genomic intervals. gGnome is written in the R6 object oriented standard and built around a powerful GenomicRanges, data.table, and igraph backend, and thus supports agile interaction with graphs consisting of hundreds of thousands of nodes and edges.
Author(s)
Maintainer: Xiaotong Yao xiaotong.yao23@gmail.com
Authors:
Marcin Imielinski mai9037@med.cornell.edu [contributor]
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.