dreme: dreme
In mskilab/skidb: Collection of R functions for accessing and parsing flat file dumps of common databases and external software used by @mskilab.
dreme R Documentation
dreme
Description
run dreme on biostrings case control input with given parameters
Usage
dreme(
case,
control = NULL,
basedir = "./",
tilim = 1000,
mink = 3,
maxk = 8,
e.thresh = 0.05,
m.thresh = NULL,
ngen = 100,
MEMEPATH = "module unload python; module load python/3.5.2; /gpfs/commons/home/mimielinski/software/meme/meme-5.0.4/scripts/dreme-py3"
)
mskilab/skidb documentation built on Feb. 6, 2023, 2:49 a.m.
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| dreme | R Documentation |
dreme
Description
run dreme on biostrings case control input with given parameters
Usage
dreme(
case,
control = NULL,
basedir = "./",
tilim = 1000,
mink = 3,
maxk = 8,
e.thresh = 0.05,
m.thresh = NULL,
ngen = 100,
MEMEPATH = "module unload python; module load python/3.5.2; /gpfs/commons/home/mimielinski/software/meme/meme-5.0.4/scripts/dreme-py3"
)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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