meme: meme
In mskilab/skidb: Collection of R functions for accessing and parsing flat file dumps of common databases and external software used by @mskilab.
meme R Documentation
meme
Description
run meme on biostring input
Usage
meme(
sequences,
basedir = "./",
alphabet = NULL,
tilim = 18000,
maxsize = 60000,
nmotifs = 8,
minw = 3,
anr = FALSE,
maxw = 50,
revcomp = TRUE,
mc.cores = 1,
MEMEPATH = "/gpfs/commons/home/mimielinski/software/meme/bin/meme"
)
Author(s)
Marcin Imielinski
mskilab/skidb documentation built on Feb. 6, 2023, 2:49 a.m.
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| meme | R Documentation |
meme
Description
run meme on biostring input
Usage
meme( sequences, basedir = "./", alphabet = NULL, tilim = 18000, maxsize = 60000, nmotifs = 8, minw = 3, anr = FALSE, maxw = 50, revcomp = TRUE, mc.cores = 1, MEMEPATH = "/gpfs/commons/home/mimielinski/software/meme/bin/meme" )
Author(s)
Marcin Imielinski
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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