Man pages for muhligs/Regmex
Motif discovery in ranked lists of sequences

align.motiffunction to display the motifs occurring in a set of...
all.mersfunction to generate all k mers of a given size
l.clusta function to cluster a set of motifs by levenshtein...
mot.chopfunction to cut a sequence into all the possible n mers it...
motif.list.pa function to calculate rank correlation p-values for a set...
motif.pa function to calculate a rank correlation p-value for a...
motifs.seqsa function to get all unique k mers in a list of seqs.
n.obs.motNumber of observed motifs
n.obs.pata function returning the number of observed motifs in a...
Regmex-packageRegular expression motif explorer.
rev.compa function returning the reverse compliment of a sequence.
seq.list.cona function that converts a list of text sequences into...
muhligs/Regmex documentation built on May 3, 2019, 9 p.m.