diff_self: Flipped Difference Image

In muschellij2/extrantsr: Extra Functions to Build on the 'ANTsR' Package

Flipped Difference Image

Description

This function flips the image over the left/right axis, then registers the flipped image to the original image and then takes a difference

Usage

diff_self(img, swapdim = TRUE, verbose = TRUE, reproducible = TRUE, seed = 1)

Arguments

img	Object of class nifti, ANTsR, or character
swapdim	Should the image be reoriented to RPI then flipped, registered, then changed back?
verbose	Print diagnostic messages
reproducible	Sets the seed and Sys.setenv(ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS = 1). See https://github.com/ANTsX/ANTs/wiki/antsRegistration-reproducibility-issues for discussion.
seed	will execute Sys.setenv(ANTS_RANDOM_SEED = seed) before running to attempt a more reproducible result. If NULL, will not set anything, but reproducible must be FALSE.

Value

Object of class nifti

muschellij2/extrantsr documentation built on June 3, 2024, 7:04 p.m.