eddy_correct: Eddy Current Correction

In muschellij2/fslr: Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')

Eddy Current Correction

Description

This function calls eddy_correct from FSL for DTI Processing

Usage

eddy_correct(infile, outfile = NULL, retimg = TRUE, reference_no = 0, ...)

Arguments

infile	input filename of 4D image.
outfile	Output filename
retimg	(logical) return image of class nifti
reference_no	Set the volume number for the reference volume that will be used as a target to register all other volumes to. (default=0, i.e. the first volume)
...	Additional arguments passed to fslcmd

Value

If retimg then object of class nifti. Otherwise, Result from system command, depends if intern is TRUE or FALSE.

muschellij2/fslr documentation built on May 10, 2024, 2:12 a.m.