bwconncomp | R Documentation |
Get Cluster of certain size from spm_bwlabel
bwconncomp( infile, outfile = NULL, retimg = TRUE, conn = 26, reorient = FALSE, spmdir = spm_dir(), verbose = TRUE, install_dir = NULL )
infile |
input filename |
outfile |
output filename |
retimg |
Return the image instead of matlab output |
conn |
Connections to be passed to MATLAB's |
reorient |
If |
spmdir |
(character) path for SPM12. If NULL, assumes SPM12 is in matlabpath. |
verbose |
Print Diagnostics |
install_dir |
directory to download SPM12 |
Name of output file or nifti
object,
depending on retimg
library(neurobase) set.seed(1234) dims = c(30, 30, 10) arr = array(rnorm(prod(dims)), dim = dims) nim = nifti(arr) mask = datatyper(nim > 1) ## Not run: cc = bwconncomp(mask) tab = table(c(cc)) ## End(Not run)
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