spm12_fmri_est: SPM12 FMRI Estimation

In muschellij2/spm12r: Wrapper Functions for 'SPM' (Statistical Parametric Mapping) Version 12 from the 'Wellcome' Trust Centre for 'Neuroimaging'

SPM12 FMRI Estimation

Description

SPM12 FMRI Estimation

Usage

spm12_fmri_est(
  ...,
  add_spm_dir = TRUE,
  spmdir = spm_dir(verbose = verbose),
  clean = TRUE,
  verbose = TRUE,
  install_dir = NULL
)

build_spm12_fmri_est(
  spm,
  write_residuals = FALSE,
  method = c("Classical", "Bayesian", "Bayesian2"),
  bayesian = list(space.volume.block_type = "Slices", signal = "UGL", ARP = 3,
    noise.UGL = 1, LogEv = "No", anova.first = "No", anova.second = "Yes", gcon =
    list(name = "", convec = numeric(0))),
  ...
)

Arguments

...	Arguments passed to matlabbatch_to_script
add_spm_dir	Add SPM12 directory from this package
spmdir	SPM dir to add, will use package default directory
clean	Remove scripts from temporary directory after running
verbose	Print diagnostic messages
install_dir	directory to download SPM12
spm	Path to SPM.mat file
write_residuals	Should residuals be written?
method	Method for model estimation
bayesian	If method = "Bayesian", this is for a 1st level model Bayesian estimation and this list specifies the parameters

Value

A list of output and results

muschellij2/spm12r documentation built on Aug. 31, 2022, 9:49 p.m.